Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800207.1_cds_XP_016468700.1_6096
CDS Infomation

[gene=LOC107791195] [db_xref=GeneID:107791195] [protein=glycerophosphodiester phosphodiesterase GDPD6-like] [protein_id=XP_016468700.1] [location=join(31749..31761,33350..33528,33803..33986,34211..34285,34603..34712,34881..35099,35627..35782,36261..36503)] [gbkey=CDS]
Sequence

ATGGTTTCACCAAGTGTTGTCCCTTATATTTTTCTGCTACTTTTTGTTGGATGCTCGGCG
AGACCTCTCTACCCACTTCCTGGCAGAAGAAATGATAGAAATAAACAGCCTTTACAAACA
TTTCGAGCGTACAACATTGCACACCGAGGTTCAAATGGAGAAATTCCTGAAGAAACTGCA
GCAGCATACATGAGAGCTATTGAAGAGGGTACTGATTTCATCGAGACAGATATTTTAGCA
TCTAAAGACGGTGCTCTTATATGCTTCCATGATGTCACCCTCGACGATACAACTGATATA
ACAAATCACAAGGAGTTTGCTAATCGGAAGAGGACCTATGAGGTTCAAGGGGTCAACACT
ACTGGATTTTTTCTCGTTGATTTCACCCTTGAAGAATTGAAGCTTCTGCGAGTAAAGCAA
AGATATCCTTTCAGAGATCAGCAATATAATGGAGAATTTTCTATTATTACTTTTGATGAG
TTCATCTCAATTGCATTGGATGCCCATAGAGTAGTTGGAATATATCCAGAGATAAAAAAT
CCAGTCTTTATCAACCAACAGGTTAAATGGCCAGGCGATAAGAGATTCGAGGACAAGTTT
GTTGAGACGCTGAAGAAGTATGGATACAGAGGTTCATATATGTCAAAGCAATGGTTAAAG
CAGCCTGCATTCATTCAATCTTTTGCTCCAACGTCACTAATTTACATATCAAATCAAACA
GATCTGCCTAAGATCTTCCTCATTGATGACGTGAATATGCCAACACAAGACACCAATCAG
TCATATTGGGAGATTACTTCAGACAGTTATCTCGACTTCATCAAGGAATATGTGGTGGGG
ATTGGGCCTTGGAAGGACAACATAATTCCTGTTTCTAGCAATTATCTGCAAACACCTTCT
GATCTCGTAGCAAGAGCACATGCCCATAATCTACAGGTTCATCCATACACTTTCCGGAAT
GAGAACAAATTCTTACACTTCAACTTCAGTGAAGATCCGTACAATGAGTATGACTACTGG
ATAAACAAGATAGGCGTCGATGGGCTCTTCACAGATTTCACAGGCAGCCTTCACCATTAT
CAGGAATGGACCAATCCATTTGCATCTGGAGAAAAAGAAGCAACTAGACTTCTGCATAAG
ATTGAATTGATGCTCTCCAAGTTCAAATACTTCAACTGA

Peptide Sequence

PEP ID

XP_016468700.1
PEP Infomation

PREDICTED: glycerophosphodiester phosphodiesterase GDPD6-like [Nicotiana tabacum]
Sequence

MVSPSVVPYIFLLLFVGCSARPLYPLPGRRNDRNKQPLQTFRAYNIAHRGSNGEIPEETA
AAYMRAIEEGTDFIETDILASKDGALICFHDVTLDDTTDITNHKEFANRKRTYEVQGVNT
TGFFLVDFTLEELKLLRVKQRYPFRDQQYNGEFSIITFDEFISIALDAHRVVGIYPEIKN
PVFINQQVKWPGDKRFEDKFVETLKKYGYRGSYMSKQWLKQPAFIQSFAPTSLIYISNQT
DLPKIFLIDDVNMPTQDTNQSYWEITSDSYLDFIKEYVVGIGPWKDNIIPVSSNYLQTPS
DLVARAHAHNLQVHPYTFRNENKFLHFNFSEDPYNEYDYWINKIGVDGLFTDFTGSLHHY
QEWTNPFASGEKEATRLLHKIELMLSKFKYFN

Transcript Sequence

Gene sequence data has not been registered.